BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008C06LP1|AL425830
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1023 1036 0.0
>3x_Contig1023
Length = 4339
Score = 1036 bits (522), Expect = 0.0
Identities = 545/550 (99%), Gaps = 2/550 (0%)
Strand = Plus / Minus
Query: 258 tatacgaatttttttaccagaggcaatcggtgaaatacaaatgcgtattctttttcgtca 317
||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4333 tatacgaattttttt-ccagaggcaatcggtgaaat-caaatgcgtattctttttcgtca 4276
Query: 318 actccgtgctacagataccgcccaaggcttccaccagcagctggatgtaatatctttgct 377
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4275 actccgtgctacagataccgcccaaggcttccaccagcagctggatgtaatatctttgct 4216
Query: 378 ctccataataattcgtataggttgctttgagttcattatttgaaaagataggtttcttca 437
|||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4215 ctccataatacttcgtataggttgctttgagttcattatttgacaagataggtttcttca 4156
Query: 438 atggtgataacaagagtttggacattggatgtataaatttatgcatttgccatacgtaaa 497
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 4155 atggtgataacaagagtttggacattggatgtataactttatgcatttgccatacgtaaa 4096
Query: 498 acaaccaaggaatgttagcacatactattctacattcgtttgcattttttacaccttccg 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4095 acaaccaaggaatgttagcacatactattctacattcgtttgcattttttacaccttccg 4036
Query: 558 tgtttgccgaatagcctatataaagatcggcttgagattttttcaactgactagggccag 617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4035 tgtttgccgaatagcctatataaagatcggcttgagattttttcaactgactagggccag 3976
Query: 618 ctactaatgtaatttgggcacctaagcattttttgatccaatttaataggaatttataac 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3975 ctactaatgtaatttgggcacctaagcattttttgatccaatttaataggaatttataac 3916
Query: 678 tggtaccaggtagggctaaatcgtctcccagtattatcttttttcccagctggaaccctg 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3915 tggtaccaggtagggctaaatcgtctcccagtattatcttttttcccagctggaaccctg 3856
Query: 738 gtattaccttccaatcatcaatactgttcaatgttctatcccagagcttttgacttttct 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3855 gtattaccttccaatcatcaatactgttcaatgttctatcccagagcttttgacttttct 3796
Query: 798 ctttcaatgc 807
||||||||||
Sbjct: 3795 ctttcaatgc 3786
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6157
Number of Sequences: 1807
Number of extensions: 6157
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)